BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007C11SP1|AL425674
(781 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1801 1548 0.0
>3x_Contig1801
Length = 57606
Score = 1548 bits (781), Expect = 0.0
Identities = 781/781 (100%)
Strand = Plus / Minus
Query: 1 atcaatttgtctgttcaataattccaaaactttagcctcagtgactgactgattcaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10133 atcaatttgtctgttcaataattccaaaactttagcctcagtgactgactgattcaaata 10074
Query: 61 ttctgatttagatttcacaactttcactgctagaatctcttttgttattaagttttgaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10073 ttctgatttagatttcacaactttcactgctagaatctcttttgttattaagttttgaca 10014
Query: 121 tttcacaacttgaccaaaagttccttgacccaaaaggtccaagaccaaatattttctgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10013 tttcacaacttgaccaaaagttccttgacccaaaaggtccaagaccaaatattttctgtt 9954
Query: 181 gtgttcaacccccaacacatcattaacgtaaaggatgtagtcactgttgacattatcatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9953 gtgttcaacccccaacacatcattaacgtaaaggatgtagtcactgttgacattatcatg 9894
Query: 241 tccattgttatatttcccctcatttggttttgttagcactcttttcgggttctttgatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9893 tccattgttatatttcccctcatttggttttgttagcactcttttcgggttctttgatgt 9834
Query: 301 ctgatatgcaaaatcgtcattacacaatgaataagtggtagttaacgacttagttagagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9833 ctgatatgcaaaatcgtcattacacaatgaataagtggtagttaacgacttagttagagc 9774
Query: 361 catcaacggcgagaccgtcttgctgcttaatgaagcacgtctatatttcggtgtggaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9773 catcaacggcgagaccgtcttgctgcttaatgaagcacgtctatatttcggtgtggaatg 9714
Query: 421 tataacgggattcaagtcctgtctcgtaaatatcttgttgaatttagggacaataattat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9713 tataacgggattcaagtcctgtctcgtaaatatcttgttgaatttagggacaataattat 9654
Query: 481 tggagaaggtggccttgacgacggaagtgaacttgagccgccacgcgtgctcatgtatgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9653 tggagaaggtggccttgacgacggaagtgaacttgagccgccacgcgtgctcatgtatgc 9594
Query: 541 acctgcagtagcgggatacacagaagaatttatggagccagccatatatcccgcagtatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9593 acctgcagtagcgggatacacagaagaatttatggagccagccatatatcccgcagtatt 9534
Query: 601 aattccaggtttcctaagctgagatggtttcgttacctgctgtggcgaaagttgactgcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9533 aattccaggtttcctaagctgagatggtttcgttacctgctgtggcgaaagttgactgcc 9474
Query: 661 accagtgacagcaaccgactgccttctttgtgcatcattatagttgggaaacggttgctt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9473 accagtgacagcaaccgactgccttctttgtgcatcattatagttgggaaacggttgctt 9414
Query: 721 ctcataaaggaacggatcaggccctgccgcacgcgcaggtggtattactaaagatgagtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9413 ctcataaaggaacggatcaggccctgccgcacgcgcaggtggtattactaaagatgagtt 9354
Query: 781 t 781
|
Sbjct: 9353 t 9353
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5284
Number of Sequences: 1807
Number of extensions: 5284
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 781
length of database: 10,358,551
effective HSP length: 16
effective length of query: 765
effective length of database: 10,329,639
effective search space: 7902173835
effective search space used: 7902173835
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)